Pectin is a heterogeneous complex polysaccharide found in the primary cell wall of most cells. In this work, lowmethoxyl pectin was extracted from pumpkin (Cucurbita moschata). The obtained pectin was characterized by GPC
FTIR and NMR spectra. The obtain results showed that structural feature of the pectin is a main chain of poly-α(1→4)-
D-galacturonic acid and occasionally interrupted by α(1→2)-linked α-L-rhamnopyranose residues and branches Galp
is linked to GalpA at C-2 position.
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Cite this paper: Vietnam J. Chem., 2020, 58(5), 592-596 Article
DOI: 10.1002/vjch.201900181
592 Wiley Online Library © 2020 Vietnam Academy of Science and Technology, Hanoi & Wiley-VCH GmbH
Extraction and structural determination of pectin from pumkin
Cucurbita moschata
Thanh Thi Thu Thuy
1*
, Do Thi Bien
2
, Quach Thi Minh Thu
1
, Do Thi Thanh Xuan
1
,
Bui Van Nguyen
3
, Ngo Van Quang
1
, Ho Duc Cuong
2
1
Institute of Chemistry, Vietnam Academy of Science and Technology, 18 Hoang Quoc Viet, Cau Giay,
Hanoi 10000, Viet Nam
2
Hanoi University of Science and Technology, 1 Dai Co Viet, Hai Ba Trung, Hanoi 10000, Viet Nam
4
University of Khanh Hoa, Nha Trang, Khanh Hoa, Viet Nam
Submitted December 2, 2019; Accepted December 10, 2019
Abstract
Pectin is a heterogeneous complex polysaccharide found in the primary cell wall of most cells. In this work, low-
methoxyl pectin was extracted from pumpkin (Cucurbita moschata). The obtained pectin was characterized by GPC
FTIR and NMR spectra. The obtain results showed that structural feature of the pectin is a main chain of poly-α(1→4)-
D-galacturonic acid and occasionally interrupted by α(1→2)-linked α-L-rhamnopyranose residues and branches Galp
is linked to GalpA at C-2 position.
Keywords. Pectin, pumpkin, Cucurbita moschata, structure.
1. INTRODUCTION
Pectin is one of the most complex plant
polysaccharides. It consists mostly of galacturonic
acid, significant amounts of rhamnose, arabinose
and galactose as well as 13 other different
monosaccharides.
[1]
Pectins are typically extracted
from citrus fruits and apple pomace.
[2]
In
combination with water and some other substances,
it can act as a thickener, gelling agent, stabilizer,
emulsifier, cation-binding agent, etc.
[3]
Pectins offer
health benefits to consumers, for example, they are
being recognized as important precursors of
substrates for gastrointestinal functions and
structures. Pectins rich in fiber are usually
recommended for diabetics, because they are able to
reduce the glycemic response and thus reduce the
need for insulin.
[4]
Pectin is also effective on
lowering the cholesterol level in blood, removing
heavy metal ions from the body, stabilizing blood
pressure, and restoring intestinal functions.
[5,6]
Pumpkin, a member of Cucurbitaceae family, is
known to contain several bioactive molecules
including proteins, peptides, polysaccharides, sterols
and para-aminobenzoic acid. These components can
be found in seeds, flesh of the fruit and the leaves
and has been regarded as a functional food.
[7]
The
fruit of pumpkin is one of the most important
vegetables in traditional agricultural systems in the
world. Cucurbita moschata was known as butternut
squash, has been used as a traditional medicine and
health food in Asian contries for many years, as it is
believed to have specific therapeutic properties
including anti-inflammatory, anti-tumour,
cholesterol lowering, hypertensive, anti-parasitic and
anti-diabetic effects. Moreover, it is also a great
source of natural and low-cost pectin.
[8,9]
In this work, pectin was extracted from pumpkin
Cucurbita moschata species. The structure of pectin
was studied by GPC, FT-IR and NMR spectra. The
degree of esterification (DE), which affects on the
application of petin, was determined by FT-IR
spectroscopy.
2. MATERIAL AND METHOD
2.1. Plan material
Pumpkin (Cucurbita moschata) was purchased from
the local market in the north part of Vietnam and
selected for their uniformity in shape, weight and
color. The pumpkin was peeled, seeded and sliced.
The slices were dried under sun light until
completely dry then were ground into powder.
Vietnam Journal of Chemistry Thanh Thi Thu Thuy et al.
© 2020 Vietnam Academy of Science and Technology, Hanoi & Wiley-VCH GmbH www.vjc.wiley-vch.de 593
2.2. Extraction and purification of pectin from
pumpkin
100 ml of 0.1 M HCl solution was stabilized at 65
°C and after that, 10 g pumpkin powder obtained
above was added to the solution and let extracting
for 2 hours. After precipitation and washing with
ethanol PA (1:4 = solution:ethanol), filtration and
freeze-drying, it was obtained 1.2 g of pectin. Crude
pectin after purification by dialysis membranes
remained 0.69 g of pure pectin (named PP) which
was used for further analysis (yield calculated from
pumpkin dry powder is 6.9 %).
2.3. Chemical analysis
Neutral monosaccharide compositions were
elucidated by the method of Bilan et al.
[10]
Alditol
acetate derivatives were prepared by hydrolysis of
ulvan sample in 2 M CF3COOH (TFA), at 100 °C for
8 hr, and analyzed by 17AAFW Shimadzu GC-FID.
Uronic acid content was determined following
the carbazole method using D-glucuronic acid as a
standard.
[11]
2.4. Gel permeation chromatography (GPC)
GPC measurement was performed on an HPLC
Agilent 1100 with a refractive index detector RID at
30
o
C. The eluent was 1.2 N NaNO3 with flow rate
of 1.0 mL/min. The sample concentration was
1mg/ml. Pullulan was used as a standard sample
2.5. IR spectrum
FT-IR spectrum of the solid sample in the form of
KBr pellets was recorded on a FTIR Affinity-1S
Shimadzu spectrometer in the range of 400 cm
-1
and
4000 cm
-1
.
2.6. NMR spectrum
1D and 2D NMR spectra were recorded on a Bruker
AVANCE III 500 MHz spectrometer at 70 °C. The
concentration of polymer was 3 mg/ml in a solvent
of D2O+1 % CD3COOD. DSS was used as an
internal standard. The water signal was suppressed
by a presaturation sequence at the water signal
frequency.
3. RESULTS AND DISCUSSION
The weight averaged molecular weight (Mw) and the
number averaged molecular weight (Mn) of PP
determined by GPC. Like other native
polysaccharides, the molecular weight distribution
of PP is high polydisperse with Mw/Mn = 2.08 and
Mw = 2.4104 g/mol. Published molar mass values
for pectins from citrus fruits and apple pomace
ranges from 1.4105 to 2.3105 g/mol, So, the molar
mass of our pumkin pectin is lower than that of
pectin from other resources.
[12,13]
The results of chemical analysis showed that the
pectin was composed of rhamnose, galacturonic
acid, galactose, arabinose and xylose with a weight
ratio of GalA:Gal:Rham:Ara:Xyl = 45.5:30.2:17.2:
4.1:3.0. Thus, galacturonic acid was the most
abundant in the pectin followed by galactose and
rhamnose.
Figure 1: FTIR spectrum of polysaccharide from
pumpkin
The FT-IR spectrum (figure 1) of PP showed the
characteristic absorption bands of pectin. The strong
and broad absorption area at 3319 cm
-1
was
attributed to the O-H stretching vibration due to
intermolecular and intramolecular hydrogen bonds
The absorption at 2927 cm
-1
was assigned to the C-H
stretching vibration.The absorption at 1739 cm
-1
was
assigned to methyl ester group. A band at 1597 cm
-1
coupled with another band at 1406 cm
-1
were from
the asymmetric and symmetric stretching vibration
of the carboxylate groups, respectively, confirming
the presence of uronic acid. Specific band in the
1200-1000 cm
-1
region is dominated by ring
vibrations overlapped with stretching vibrations of
(C-OH) side groups and the (C-O-C) glycosidic
band vibration, which is unique to pectin
polysaccharide.
[14,15]
Pectins are classified as low methoxyl (LM) or
high methoxyl (HM) according to their degree of
esterification. The degree of esterification (DE)
affects on the application of petin and it is defined as
follows: (number of esterified carboxylic
groups/number of total carboxylic groups) x 100. In
IR spectrum, DE is inferred from the ratio of the
area of the band at 1739 cm
-1
(corresponding to the
number of esterified carboxylic groups) over the
sum of the areas of the bands at 1739 cm
-1
and 1597
Vietnam Journal of Chemistry Extraction and structural determination of
© 2020 Vietnam Academy of Science and Technology, Hanoi & Wiley-VCH GmbH www.vjc.wiley-vch.de 594
cm
-1
(corresponding to the number of total
carboxylic groups).
[14]
For our PP sample, the DE
was estimated from IR spectrum equal 23.3 %.
NMR spectroscopy of PP and the literature data
[16-18]
were applied to identify the signals of sugar
ring and carbon/hydrogen of the pumpkin pectin.
In
1
H spectrum of PP (figure 2a), a very strong
signal at 3.81 ppm related methyl groups binding to
carboxyl groups of galacturonic acid. The peaks at
the high field (1.24-1.15 ppm) were assigned to the
CH3(C6) of rhamnose.
In
13
C NMR spectrum (figure 2b), a signal at
about 57.96 ppm was assigned to methyl groups
attached to carboxylic groups of galacturonic acid
and a signal at 172.9 ppm was attributed to
carboxylic groups linked to methyl groups.
Rhamnose gave the clear resonance for CH3(C6) at
17.4 ppm. In addition, the peak at 61.23 ppm
confirmed the presence of galactose in the pectin.
Figure 2: (a)
1
H NMR and (b)
13
C NMR spectrum
In HSQC spectrum (figure 3), GalpA gave two
anomeric carbon/hydrogen signals at 100.1/5.35
ppm and 98.55/5.27 ppm for 1,4-GalpA and 1,4-
GalpA connected with1,2-Rhap, respectively.
Rhamnose gave clear resonance signals of C-1/H-
1and C-6/H-6 in HSQC spectrum (figure 3): C-1/H-
1signal for 1,2-linked Rhap appeared at 99.5/5.08
ppm, C-6/H-6 chemical shifts at 17.40/1.15 ppm and
17.40/1.24 ppm. The C-1/H-1 signal at 99.0/4.95
ppm and C-6/H-6 signal at 61.23/3.83 ppm indicated
the presence of D-Galp.
The cross peak in HMBC spectrum (figure 4) at
5.35/74.57 ppm (H-1 of GalpA and C-2 of Rhap)
confirmed the linkage between Rhap and GalpA,
which is →4)-GalpA-(1→2)-Rhap-(1→. The 1,4-
linkage between GalpA in the main chain was
confirmed by a cross peak of H-1 and C-4 at
5.35/77.92 ppm. The peaks at 4.95/72.4 ppm (H-1 of
Galp and C-2 of GalpA) and at 4.95/72.1 ppm (H-1
of Galp and C-2 of Galp) confirmed the 1,2-linkage
of Galp in the side chain.
Figure 3: HSQC spectrum
Figure 4: HMBC spectrum
Vietnam Journal of Chemistry Thanh Thi Thu Thuy et al.
© 2020 Vietnam Academy of Science and Technology, Hanoi & Wiley-VCH GmbH www.vjc.wiley-vch.de 595
Based on all the results above, structure of PP
can be proposed (figure 5). It contains a main chain
of poly-α(1→4)-D-galacturonic acid and interrupted
by α(1→2)-linked α-L-rhamnopyranose residues and
branches Galp is linked to GalpA at C-2 position.
Figure 5: Dominant structure of pectin from pumkin
Cucurbita moschata
4. CONCLUSION
The current research characterized chemical
composition and structure of a pectin extracted from
pumpkin Cucurbita moschata. The obtained results
indicated that dominant structural characteristics of
the pumpkin pectin is a main chain of poly-α(1→4)-
D-galacturonic acid interrupted by α(1→2)-linked
rhamnopyranose residues. Branches Galp are linked
to GalpA at C-2 position. This pectin was
characterized as low-methoxyl pectin with DE =
23.3.
Acknowledgement. This research is funded by
Vietnam Academy of Science and Technology (grant
number VAST04.02/19-20).
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Corresponding author: Thanh Thi Thu Thuy
Institute of Chemistry, Vietnam Academy of Science and Technology
18, Hoang Quoc Viet, Cau Giay, Hanoi 10000, Viet Nam
E-mail: thuyttt@ich.vast.vn.